Healthcare Lab Results Inbox Parser

Critical lab results should trigger an alert in seconds — not sit in an inbox. A persistent service parses every HL7/FHIR file the moment it arrives and routes out-of-range values to the alert queue instantly.

Critical Values Waiting to Be Noticed

Healthcare labs deliver results in a mix of formats — HL7 v2 messages, FHIR R4 JSON bundles, plain CSVs — and somebody has to triage them for abnormal values. In a high-volume practice, a clinician manually reviews dozens of result files before flagging a critical HbA1c or out-of-range eGFR. The process is slow, inconsistent under workload pressure, and a genuine patient safety risk when a critical result sits unread in an inbox.

High Volume, High Risk

Under workload pressure, critical values get missed. A result sitting unread in an inbox for hours is a patient safety issue — not an inconvenience.

Inconsistent Format Handling

Results arrive as HL7 v2, FHIR R4, and plain CSVs — each requiring different parsing logic. Manual handling is error-prone and slow across format variations.

Real-Time FHIR-Compliant Triage. Zero Manual Steps.

The Smart Automation Framework watches your HL7/FHIR inbox directory and, the moment a new result file arrives, parses it, checks every LOINC-coded observation against your reference ranges, and routes out-of-range values directly to your alert queue and FHIR server — in real time, with zero manual triage. Generated once from a plain-English description; runs as a persistent service with zero AI tokens per evaluation.

Step 1 — Describe the Parser

Write a prompt specifying your HL7/FHIR inbox directory, LOINC reference ranges file, FHIR endpoint URL, and alert queue path. Include log file location for parsing errors.

Step 2 — AI Generates the Clinical Service

Gemini CLI generates a Python service using hl7apy and fhirclient with LOINC code mapping, threshold evaluation, and structured alert POSTs to your FHIR endpoint. A systemd service unit is produced and installed.

Step 3 — Results Triaged in Real Time

The service runs continuously, processing every file that arrives — routing abnormal results to the alert queue and FHIR server within seconds. No queue builds up, no result goes unseen. Zero AI tokens per evaluation.

One Prompt. Continuous Clinical Coverage.
"Watch $HL7_INBOX for new .hl7 and .json files. Parse LOINC-coded observations. For each result, check value against $REFERENCE_RANGES_JSON. If out-of-range, write an alert object to $ALERT_QUEUE and POST to $FHIR_ENDPOINT. Log all parsing errors to lab_parser.log."
VariableExample Value
HL7_INBOX/var/hl7/inbox
REFERENCE_RANGES_JSON/etc/lab_parser/ranges.json
FHIR_ENDPOINThttps://fhir.clinic.local/Observation
ALERT_QUEUE/var/alerts/queue.json

Setup (one-time)

~15,000 tokens for complex clinical parsing logic. The most you'll ever pay for this pipeline.

Per Execution

Zero tokens — deterministic rule-based LOINC evaluation against reference ranges.

Service Runtime

Zero tokens — pure local Python execution as a systemd/launchd service.

Always On. Always Consistent. Zero Triage Overhead.

Abnormal lab results should trigger an alert in seconds, not sit in an inbox waiting for a human to notice them. The awaBerry Smart Automation Framework makes real-time, FHIR-compliant result triage a background service — always on, always consistent, written from a plain-English description of your clinical workflow.

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Real-time triage for every lab result

Start from a plain-English description of your clinical workflow. The framework handles everything else.